CellDesignerTM Plugins allow developers to extend the function of CellDesigner. CellDesignerTM 4.0 onwards support Plugin functions.
If you are interested in building your own CellDesigner Plugin, please check the following documents:
| PathwayAccess | |
| Version: | 1.0 new |
| Release Date: | July 20. 2010 |
| Description: | a suite of CellDesigner plugins directly interact with pathway datasources to - download and integrate one or more pathways to a CellDesigner model - upload (or commit) a CellDesigner model to a datasource. |
| Url: | http://vrac.iastate.edu/~jlv/pathwayaccess/ |
| Reference: |
PathwayAccess: CellDesigner Plugins for Pathway Databases John L. Van Hemert; Julie A. Dickerson Bioinformatics 2010; doi: 10.1093/bioinformatics/btq423 PMID: 20647521 |
| Work in | CellDesigner 4.0.1 and above |
| SBMLsqueezer | |
| Version: | 1.3 new |
| Release Date: | April 4. 2010 |
| Description: | A CellDesigner plugin to generate kinetic rate equations for biochemical networks |
| Url: | http://www.ra.cs.uni-tuebingen.de/software/SBMLsqueezer |
| Reference: | Andreas Draeger , Nadine Hassis , Jochen Supper , Adrian Schroeder and Andreas Zell, SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks, BMC Systems Biology 2008, 2:39doi:10.1186/1752-0509-2-39, http://www.biomedcentral.com/1752-0509/2/39/abstract. |
| Work in | CellDesigner 4.0alpha and above |
| Import Notes | |
| Version: | 1.1 |
| Release Date: | Aug 4, 2008 |
| Description: | Import Notes data from CSV file |
| Download: | Jar File, Readme |
| Reference: | |
| Work in | CellDesigner 4.0 |
| Mapping Array Mass | |
| Version: | 2.0 new |
| Release Date: | Aug 28, 2009 |
| Description: | Mapping Array Data to the model for CellDesigner 4.1beta |
| Download: | Jar File (installed with CellDesigner), Readme & Sample Data |
| Reference: | |
| Work in | CellDesigner 4.1beta (as sample plugin) |
PlugIn License Policy:
Plugins are separate works which use CellDesigner as a Java code library. Plugins are therefore governed by independent software licenses distributed with and specific to each plugin.
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